Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LAMP1P11279 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LAMP1P11279 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LAMP1P11279 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 AL035456.1-201ENST00000456064 1369 ntBASIC14.87□□□□□ -0.03
LAMP1P11279 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 TARDBPP1-201ENST00000442013 1203 ntBASIC14.87□□□□□ -0.03
LAMP1P11279 AC023141.5-201ENST00000458585 616 ntBASIC14.87□□□□□ -0.03
LAMP1P11279 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
LAMP1P11279 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.87□□□□□ -0.03
LAMP1P11279 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
LAMP1P11279 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.87□□□□□ -0.03
LAMP1P11279 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 AC099063.4-201ENST00000641099 1602 ntBASIC14.87□□□□□ -0.03
LAMP1P11279 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.87□□□□□ -0.03
LAMP1P11279 AC106881.1-201ENST00000605849 3329 ntBASIC14.87□□□□□ -0.03
LAMP1P11279 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.87□□□□□ -0.03
LAMP1P11279 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LAMP1P11279 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LAMP1P11279 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.86□□□□□ -0.03
LAMP1P11279 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.86□□□□□ -0.03
LAMP1P11279 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.86□□□□□ -0.03
LAMP1P11279 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 AC211486.1-202ENST00000416371 468 ntBASIC14.86□□□□□ -0.03
LAMP1P11279 AC211476.1-201ENST00000503899 468 ntBASIC14.86□□□□□ -0.03
LAMP1P11279 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.86□□□□□ -0.03
LAMP1P11279 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LAMP1P11279 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LAMP1P11279 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.86□□□□□ -0.03
LAMP1P11279 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 MIR6080-201ENST00000617359 66 ntBASIC14.86□□□□□ -0.03
LAMP1P11279 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.86□□□□□ -0.03
LAMP1P11279 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms