Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 KRT18P43-201ENST00000469825 1281 ntBASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 AC124283.3-201ENST00000570869 594 ntBASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 MIR5189-201ENST00000577370 114 ntBASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 AL049840.4-201ENST00000602422 811 ntBASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 AC133552.6-201ENST00000613406 534 ntBASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 COX11-210ENST00000639671 696 ntBASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 PAUPAR-201ENST00000630360 2965 ntBASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB40ALP0C0E4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 KRT223P-202ENST00000449164 1292 ntBASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 TDH-203ENST00000531764 1110 ntBASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 AC120045.2-201ENST00000567334 178 ntBASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 AL022328.1-201ENST00000610050 478 ntBASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB40ALP0C0E4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms