Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC091046.1-201ENST00000331871 207 ntBASIC20.29■□□□□ 0.84
LTN1O94822 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTN1O94822 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.29■□□□□ 0.84
LTN1O94822 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.28■□□□□ 0.84
LTN1O94822 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 AC004899.1-201ENST00000424687 1714 ntBASIC20.28■□□□□ 0.84
LTN1O94822 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
LTN1O94822 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LTN1O94822 INE2-201ENST00000630399 1874 ntBASIC20.28■□□□□ 0.84
LTN1O94822 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.28■□□□□ 0.84
LTN1O94822 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 BNIP3P13-201ENST00000599968 566 ntBASIC20.28■□□□□ 0.84
LTN1O94822 AC002472.3-201ENST00000640124 621 ntBASIC20.28■□□□□ 0.84
LTN1O94822 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.28■□□□□ 0.84
LTN1O94822 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTN1O94822 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.28■□□□□ 0.84
LTN1O94822 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
LTN1O94822 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 REXO1L5P-201ENST00000622260 2098 ntBASIC20.27■□□□□ 0.84
LTN1O94822 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.27■□□□□ 0.84
LTN1O94822 HLA-DQB2-229ENST00000411527 1059 ntBASIC20.27■□□□□ 0.84
LTN1O94822 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.27■□□□□ 0.84
LTN1O94822 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.27■□□□□ 0.84
LTN1O94822 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.27■□□□□ 0.84
LTN1O94822 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.27■□□□□ 0.84
LTN1O94822 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.27■□□□□ 0.84
LTN1O94822 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LTN1O94822 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LTN1O94822 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.27■□□□□ 0.84
LTN1O94822 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.27■□□□□ 0.84
LTN1O94822 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LTN1O94822 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LTN1O94822 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LTN1O94822 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LTN1O94822 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LTN1O94822 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LTN1O94822 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
LTN1O94822 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.27■□□□□ 0.83
LTN1O94822 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LTN1O94822 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC20.26■□□□□ 0.83
LTN1O94822 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.26■□□□□ 0.83
LTN1O94822 MIR33B-201ENST00000385104 96 ntBASIC20.26■□□□□ 0.83
LTN1O94822 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LTN1O94822 AC010141.1-201ENST00000411585 623 ntBASIC20.26■□□□□ 0.83
LTN1O94822 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC20.26■□□□□ 0.83
LTN1O94822 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.26■□□□□ 0.83
LTN1O94822 EEF1DP6-201ENST00000449232 372 ntBASIC20.26■□□□□ 0.83
LTN1O94822 AC103988.2-201ENST00000561804 725 ntBASIC20.26■□□□□ 0.83
LTN1O94822 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.26■□□□□ 0.83
LTN1O94822 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.26■□□□□ 0.83
LTN1O94822 AC105250.1-201ENST00000509378 2057 ntBASIC20.26■□□□□ 0.83
LTN1O94822 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
LTN1O94822 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LTN1O94822 ELK2AP-201ENST00000392510 1007 ntBASIC20.26■□□□□ 0.83
LTN1O94822 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.26■□□□□ 0.83
LTN1O94822 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.26■□□□□ 0.83
LTN1O94822 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC20.26■□□□□ 0.83
LTN1O94822 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.26■□□□□ 0.83
LTN1O94822 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LTN1O94822 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.26■□□□□ 0.83
LTN1O94822 AL023803.2-201ENST00000620080 638 ntBASIC20.26■□□□□ 0.83
LTN1O94822 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.26■□□□□ 0.83
LTN1O94822 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LTN1O94822 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 AC026471.1-201ENST00000564629 3026 ntBASIC20.25■□□□□ 0.83
LTN1O94822 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LTN1O94822 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms