Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 COX11-210ENST00000639671 696 ntBASIC19.36■□□□□ 0.69
CACNA1FO60840 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1FO60840 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1FO60840 AC055811.4-201ENST00000624039 1754 ntBASIC19.36■□□□□ 0.69
CACNA1FO60840 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CACNA1FO60840 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1FO60840 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1FO60840 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1FO60840 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
CACNA1FO60840 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1FO60840 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.36■□□□□ 0.69
CACNA1FO60840 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1FO60840 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CACNA1FO60840 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1FO60840 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1FO60840 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CACNA1FO60840 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.35■□□□□ 0.69
CACNA1FO60840 AC007274.1-201ENST00000439805 662 ntBASIC19.35■□□□□ 0.69
CACNA1FO60840 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1FO60840 AL512343.1-201ENST00000605837 169 ntBASIC19.35■□□□□ 0.69
CACNA1FO60840 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA1FO60840 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1FO60840 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA1FO60840 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CACNA1FO60840 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CACNA1FO60840 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CACNA1FO60840 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CACNA1FO60840 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1FO60840 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.35■□□□□ 0.69
CACNA1FO60840 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.35■□□□□ 0.69
CACNA1FO60840 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.35■□□□□ 0.69
CACNA1FO60840 CICP6-201ENST00000457191 2729 ntBASIC19.35■□□□□ 0.69
CACNA1FO60840 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CACNA1FO60840 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1FO60840 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1FO60840 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1FO60840 AC099336.1-201ENST00000417053 1171 ntBASIC19.34■□□□□ 0.69
CACNA1FO60840 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.34■□□□□ 0.69
CACNA1FO60840 AC078819.1-201ENST00000547454 765 ntBASIC19.34■□□□□ 0.69
CACNA1FO60840 AC012085.1-201ENST00000548270 765 ntBASIC19.34■□□□□ 0.69
CACNA1FO60840 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.34■□□□□ 0.69
CACNA1FO60840 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.34■□□□□ 0.69
CACNA1FO60840 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CACNA1FO60840 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CACNA1FO60840 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA1FO60840 CLUHP2-201ENST00000426660 1303 ntBASIC19.34■□□□□ 0.69
CACNA1FO60840 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1FO60840 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA1FO60840 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.34■□□□□ 0.69
CACNA1FO60840 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.34■□□□□ 0.69
CACNA1FO60840 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CACNA1FO60840 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CACNA1FO60840 AC092933.1-201ENST00000393644 945 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.33■□□□□ 0.69
CACNA1FO60840 C2orf27AP3-201ENST00000434123 579 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 AL355994.2-201ENST00000447882 704 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1FO60840 ALG3P1-201ENST00000508806 1114 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.33■□□□□ 0.69
CACNA1FO60840 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.33■□□□□ 0.69
CACNA1FO60840 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.33■□□□□ 0.69
CACNA1FO60840 BTNL10-201ENST00000595971 695 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 AC004466.1-201ENST00000599515 1080 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 ECM1P1-201ENST00000604092 1279 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 AL354718.3-201ENST00000616414 581 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 AC138951.2-201ENST00000623455 1161 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 CR382287.1-201ENST00000623954 586 ntBASIC19.33■□□□□ 0.69
CACNA1FO60840 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
CACNA1FO60840 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1FO60840 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CACNA1FO60840 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1FO60840 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CACNA1FO60840 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
CACNA1FO60840 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms