Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AL133338.1-201ENST00000565695 1517 ntBASIC15.58■□□□□ 0.08
PCDHGA12O60330 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGA12O60330 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PCDHGA12O60330 AC092384.3-202ENST00000564646 2873 ntBASIC15.58■□□□□ 0.08
PCDHGA12O60330 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 GGT3P-204ENST00000453783 1664 ntBASIC15.57■□□□□ 0.08
PCDHGA12O60330 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 FLJ16779-201ENST00000612722 7638 ntBASIC15.57■□□□□ 0.08
PCDHGA12O60330 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 ME2P1-201ENST00000426028 1970 ntBASIC15.57■□□□□ 0.08
PCDHGA12O60330 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 RNA5SP412-201ENST00000516234 123 ntBASIC15.57■□□□□ 0.08
PCDHGA12O60330 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 AC243562.2-201ENST00000561247 970 ntBASIC15.57■□□□□ 0.08
PCDHGA12O60330 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 MIR4538-201ENST00000581377 78 ntBASIC15.57■□□□□ 0.08
PCDHGA12O60330 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 AC093525.8-201ENST00000624099 1342 ntBASIC15.57■□□□□ 0.08
PCDHGA12O60330 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGA12O60330 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGA12O60330 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC104640.1-201ENST00000562617 2109 ntBASIC15.56■□□□□ 0.08
PCDHGA12O60330 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC023824.1-201ENST00000562945 2975 ntBASIC15.56■□□□□ 0.08
PCDHGA12O60330 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC005229.1-201ENST00000392885 409 ntBASIC15.56■□□□□ 0.08
PCDHGA12O60330 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 FO681548.1-201ENST00000455617 1132 ntBASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 TDH-203ENST00000531764 1110 ntBASIC15.56■□□□□ 0.08
PCDHGA12O60330 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 MIR6869-201ENST00000619434 62 ntBASIC15.56■□□□□ 0.08
PCDHGA12O60330 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms