Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 AC127383.1-201ENST00000444697 1800 ntBASIC14.03□□□□□ -0.16
CXCL13O43927 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.03□□□□□ -0.16
CXCL13O43927 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.03□□□□□ -0.16
CXCL13O43927 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.03□□□□□ -0.16
CXCL13O43927 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CXCL13O43927 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CXCL13O43927 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.02□□□□□ -0.16
CXCL13O43927 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL13O43927 AC092850.2-201ENST00000623821 2697 ntBASIC14.02□□□□□ -0.16
CXCL13O43927 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL13O43927 AC007950.2-201ENST00000615045 2347 ntBASIC14.02□□□□□ -0.16
CXCL13O43927 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
CXCL13O43927 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCL13O43927 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCL13O43927 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.02□□□□□ -0.16
CXCL13O43927 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CXCL13O43927 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.02□□□□□ -0.16
CXCL13O43927 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CXCL13O43927 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL13O43927 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CXCL13O43927 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CXCL13O43927 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.02□□□□□ -0.16
CXCL13O43927 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL13O43927 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CXCL13O43927 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.02□□□□□ -0.17
CXCL13O43927 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL13O43927 DGCR5-201ENST00000399539 862 ntBASIC14.02□□□□□ -0.17
CXCL13O43927 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
CXCL13O43927 AC098850.1-201ENST00000419919 790 ntBASIC14.02□□□□□ -0.17
CXCL13O43927 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.02□□□□□ -0.17
CXCL13O43927 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL13O43927 FAM86LP-201ENST00000478302 853 ntBASIC14.02□□□□□ -0.17
CXCL13O43927 AP005018.1-201ENST00000525475 301 ntBASIC14.02□□□□□ -0.17
CXCL13O43927 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
CXCL13O43927 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.02□□□□□ -0.17
CXCL13O43927 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL13O43927 AC015910.1-201ENST00000579400 975 ntBASIC14.02□□□□□ -0.17
CXCL13O43927 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.02□□□□□ -0.17
CXCL13O43927 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL13O43927 AC105233.6-201ENST00000642093 218 ntBASIC14.02□□□□□ -0.17
CXCL13O43927 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL13O43927 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.02□□□□□ -0.17
CXCL13O43927 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL13O43927 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.02□□□□□ -0.17
CXCL13O43927 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.02□□□□□ -0.17
CXCL13O43927 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL13O43927 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL13O43927 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CXCL13O43927 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CXCL13O43927 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.02□□□□□ -0.17
CXCL13O43927 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CXCL13O43927 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL13O43927 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL13O43927 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL13O43927 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CXCL13O43927 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCL13O43927 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 AL133267.1-201ENST00000398220 340 ntBASIC14.01□□□□□ -0.17
CXCL13O43927 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL13O43927 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CXCL13O43927 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL13O43927 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.01□□□□□ -0.17
CXCL13O43927 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCL13O43927 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCL13O43927 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CXCL13O43927 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 AC132872.4-202ENST00000622924 2756 ntBASIC14.01□□□□□ -0.17
CXCL13O43927 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms