Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC092910.1-201ENST00000482027 1129 ntBASIC10.79□□□□□ -0.68
NDUFA1O15239 KRT18P34-201ENST00000488218 1270 ntBASIC10.79□□□□□ -0.68
NDUFA1O15239 AC093909.1-201ENST00000504731 1122 ntBASIC10.79□□□□□ -0.68
NDUFA1O15239 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.79□□□□□ -0.68
NDUFA1O15239 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.79□□□□□ -0.68
NDUFA1O15239 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC10.79□□□□□ -0.68
NDUFA1O15239 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.79□□□□□ -0.68
NDUFA1O15239 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.79□□□□□ -0.68
NDUFA1O15239 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.79□□□□□ -0.68
NDUFA1O15239 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.79□□□□□ -0.68
NDUFA1O15239 ACTL9-202ENST00000612068 1252 ntBASIC10.79□□□□□ -0.68
NDUFA1O15239 TP73-AS1-207ENST00000624167 988 ntBASIC10.79□□□□□ -0.68
NDUFA1O15239 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC10.79□□□□□ -0.68
NDUFA1O15239 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.79□□□□□ -0.68
NDUFA1O15239 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC10.79□□□□□ -0.68
NDUFA1O15239 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
NDUFA1O15239 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.78□□□□□ -0.68
NDUFA1O15239 AC087386.2-201ENST00000623212 4637 ntBASIC10.78□□□□□ -0.68
NDUFA1O15239 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
NDUFA1O15239 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
NDUFA1O15239 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 AC004870.1-201ENST00000315132 882 ntBASIC10.78□□□□□ -0.68
NDUFA1O15239 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.78□□□□□ -0.68
NDUFA1O15239 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 HMGA1P7-201ENST00000406908 502 ntBASIC10.78□□□□□ -0.68
NDUFA1O15239 CRYGEP-201ENST00000412192 528 ntBASIC10.78□□□□□ -0.68
NDUFA1O15239 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 AL773604.1-201ENST00000617417 272 ntBASIC10.78□□□□□ -0.68
NDUFA1O15239 AC117500.6-201ENST00000624871 588 ntBASIC10.78□□□□□ -0.68
NDUFA1O15239 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.78□□□□□ -0.68
NDUFA1O15239 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
NDUFA1O15239 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC10.78□□□□□ -0.68
NDUFA1O15239 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
NDUFA1O15239 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
NDUFA1O15239 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC10.78□□□□□ -0.68
NDUFA1O15239 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 ZBED1P1-201ENST00000502364 1930 ntBASIC10.78□□□□□ -0.68
NDUFA1O15239 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
NDUFA1O15239 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NDUFA1O15239 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
NDUFA1O15239 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.77□□□□□ -0.68
NDUFA1O15239 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
NDUFA1O15239 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
NDUFA1O15239 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms