Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMX2-CTNND1H3BSU7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC022532.1-201ENST00000624563 1728 ntBASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 LINC01144-201ENST00000626198 1710 ntBASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 HILS1-202ENST00000545329 423 ntBASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 TMEM261P1-201ENST00000604899 340 ntBASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 AC139749.1-202ENST00000617529 3139 ntBASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TMX2-CTNND1H3BSU7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMX2-CTNND1H3BSU7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC026748.1-201ENST00000624349 3251 ntBASIC15.46■□□□□ 0.06
TMX2-CTNND1H3BSU7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMX2-CTNND1H3BSU7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC006538.1-201ENST00000567905 1585 ntBASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 AL031731.1-201ENST00000642131 2094 ntBASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 TTTY23B-201ENST00000442790 549 ntBASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC007389.4-201ENST00000454674 793 ntBASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 AL359258.3-201ENST00000622910 2331 ntBASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMX2-CTNND1H3BSU7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.44■□□□□ 0.06
TMX2-CTNND1H3BSU7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms