Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.11■□□□□ 0.33
Q9Y3F1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.11■□□□□ 0.33
Q9Y3F1 MIR3619-201ENST00000579667 83 ntBASIC17.11■□□□□ 0.33
Q9Y3F1 PPY2P-201ENST00000582808 702 ntBASIC17.11■□□□□ 0.33
Q9Y3F1 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Q9Y3F1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.11■□□□□ 0.33
Q9Y3F1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
Q9Y3F1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9Y3F1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9Y3F1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9Y3F1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Q9Y3F1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9Y3F1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.11■□□□□ 0.33
Q9Y3F1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Q9Y3F1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.1■□□□□ 0.33
Q9Y3F1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 AC092364.2-201ENST00000596710 2692 ntBASIC17.1■□□□□ 0.33
Q9Y3F1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.1■□□□□ 0.33
Q9Y3F1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Q9Y3F1 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Q9Y3F1 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 ELK2AP-201ENST00000392510 1007 ntBASIC17.1■□□□□ 0.33
Q9Y3F1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Q9Y3F1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Q9Y3F1 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.1■□□□□ 0.33
Q9Y3F1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.1■□□□□ 0.33
Q9Y3F1 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Q9Y3F1 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.1■□□□□ 0.33
Q9Y3F1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 AC073413.1-201ENST00000603927 732 ntBASIC17.1■□□□□ 0.33
Q9Y3F1 AC007663.3-201ENST00000609632 465 ntBASIC17.1■□□□□ 0.33
Q9Y3F1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Q9Y3F1 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Q9Y3F1 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.1■□□□□ 0.33
Q9Y3F1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.09■□□□□ 0.33
Q9Y3F1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Q9Y3F1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.09■□□□□ 0.33
Q9Y3F1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Q9Y3F1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Q9Y3F1 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.09■□□□□ 0.33
Q9Y3F1 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.09■□□□□ 0.33
Q9Y3F1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.09■□□□□ 0.33
Q9Y3F1 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.09■□□□□ 0.33
Q9Y3F1 CHMP1AP1-201ENST00000445563 662 ntBASIC17.09■□□□□ 0.33
Q9Y3F1 HIST2H2BC-201ENST00000498492 580 ntBASIC17.09■□□□□ 0.33
Q9Y3F1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.09■□□□□ 0.33
Q9Y3F1 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.09■□□□□ 0.33
Q9Y3F1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.09■□□□□ 0.33
Q9Y3F1 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.09■□□□□ 0.33
Q9Y3F1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.09■□□□□ 0.33
Q9Y3F1 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.09■□□□□ 0.33
Q9Y3F1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 OR10B1P-201ENST00000601666 907 ntBASIC17.09■□□□□ 0.33
Q9Y3F1 AL451050.2-201ENST00000606967 682 ntBASIC17.09■□□□□ 0.33
Q9Y3F1 AL021578.1-201ENST00000613646 709 ntBASIC17.09■□□□□ 0.33
Q9Y3F1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.09■□□□□ 0.33
Q9Y3F1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 AC127383.1-201ENST00000444697 1800 ntBASIC17.09■□□□□ 0.33
Q9Y3F1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9Y3F1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms