Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC084121.3-201ENST00000641716 218 ntBASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HDGFL3Q9Y3E1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 AC090616.6-203ENST00000579186 1945 ntBASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 KRT18P43-201ENST00000469825 1281 ntBASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 MEIS3P1-201ENST00000495167 958 ntBASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 AC015910.1-201ENST00000579400 975 ntBASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 AC004840.1-201ENST00000636359 365 ntBASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HDGFL3Q9Y3E1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 RPL5P21-201ENST00000404620 815 ntBASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 KRT18P64-201ENST00000434946 1219 ntBASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 SRD5A3P1-201ENST00000603021 949 ntBASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 AC009118.2-201ENST00000613275 655 ntBASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.1□□□□□ -0.15
HDGFL3Q9Y3E1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms