Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 GK-202ENST00000378941 458 ntTSL 3 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 PTP4A1P2-201ENST00000546033 454 ntBASIC16.21■□□□□ 0.19
SCML2Q9UQR0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 BTNL10-201ENST00000595971 695 ntBASIC16.21■□□□□ 0.19
SCML2Q9UQR0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCML2Q9UQR0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCML2Q9UQR0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCML2Q9UQR0 AL139384.1-201ENST00000612143 3047 ntBASIC16.21■□□□□ 0.18
SCML2Q9UQR0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SCML2Q9UQR0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.21■□□□□ 0.18
SCML2Q9UQR0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.21■□□□□ 0.18
SCML2Q9UQR0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCML2Q9UQR0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 OR8S1-201ENST00000310194 1080 ntBASIC16.2■□□□□ 0.18
SCML2Q9UQR0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 GPR53P-205ENST00000457298 1084 ntBASIC16.2■□□□□ 0.18
SCML2Q9UQR0 AC093433.1-201ENST00000458048 571 ntBASIC16.2■□□□□ 0.18
SCML2Q9UQR0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 SLC25A47P1-201ENST00000531577 414 ntBASIC16.2■□□□□ 0.18
SCML2Q9UQR0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCML2Q9UQR0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 AC020658.6-201ENST00000623564 1870 ntBASIC16.19■□□□□ 0.18
SCML2Q9UQR0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.19■□□□□ 0.18
SCML2Q9UQR0 AC079776.1-201ENST00000401540 1152 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms