Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 AL136309.1-201ENST00000403917 691 ntBASIC21.01■□□□□ 0.95
PHF8Q9UPP1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 AC022616.1-201ENST00000518688 554 ntBASIC21.01■□□□□ 0.95
PHF8Q9UPP1 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF8Q9UPP1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PHF8Q9UPP1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21■□□□□ 0.95
PHF8Q9UPP1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC21■□□□□ 0.95
PHF8Q9UPP1 IGF1-203ENST00000392904 761 ntTSL 5 BASIC21■□□□□ 0.95
PHF8Q9UPP1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21■□□□□ 0.95
PHF8Q9UPP1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC21■□□□□ 0.95
PHF8Q9UPP1 EEF1DP6-201ENST00000449232 372 ntBASIC21■□□□□ 0.95
PHF8Q9UPP1 AC021723.1-201ENST00000486306 515 ntBASIC21■□□□□ 0.95
PHF8Q9UPP1 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC21■□□□□ 0.95
PHF8Q9UPP1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC21■□□□□ 0.95
PHF8Q9UPP1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21■□□□□ 0.95
PHF8Q9UPP1 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PHF8Q9UPP1 AC026740.1-201ENST00000607068 791 ntBASIC21■□□□□ 0.95
PHF8Q9UPP1 AF254983.2-201ENST00000612331 135 ntBASIC21■□□□□ 0.95
PHF8Q9UPP1 AC100757.4-201ENST00000626934 759 ntBASIC21■□□□□ 0.95
PHF8Q9UPP1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21■□□□□ 0.95
PHF8Q9UPP1 AC080080.1-201ENST00000625121 2420 ntBASIC21■□□□□ 0.95
PHF8Q9UPP1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21■□□□□ 0.95
PHF8Q9UPP1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
PHF8Q9UPP1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
PHF8Q9UPP1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PHF8Q9UPP1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF8Q9UPP1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PHF8Q9UPP1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AC011742.3-201ENST00000439053 820 ntBASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AC013355.1-201ENST00000562625 723 ntBASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 BNIP3P13-201ENST00000599968 566 ntBASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.99■□□□□ 0.95
PHF8Q9UPP1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 AC069224.1-201ENST00000566372 1715 ntBASIC20.98■□□□□ 0.95
PHF8Q9UPP1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF8Q9UPP1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms