Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 FAM197Y7-201ENST00000432892 766 ntBASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 AC004898.1-201ENST00000451057 766 ntBASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDLIM7Q9NR12 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 ACKR1-201ENST00000368121 1240 ntBASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AL662890.1-201ENST00000396818 632 ntBASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 FNTAP2-201ENST00000430308 634 ntBASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 BX284668.4-201ENST00000453917 508 ntBASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AC078819.1-201ENST00000547454 765 ntBASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AC012085.1-201ENST00000548270 765 ntBASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDLIM7Q9NR12 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 AL133267.1-201ENST00000398220 340 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 NUS1P3-201ENST00000423502 862 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 EIF4HP1-201ENST00000453115 687 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 UPF3AP2-201ENST00000457924 1132 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 KRT18P43-201ENST00000469825 1281 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 HIST2H2BC-201ENST00000498492 580 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 AC015910.1-201ENST00000579400 975 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 AC138951.2-201ENST00000623455 1161 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDLIM7Q9NR12 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms