Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 TARDBPP1-201ENST00000442013 1203 ntBASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 HLA-V-204ENST00000476601 1289 ntBASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 TNRC18P2-201ENST00000417666 2714 ntBASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC40Q9H9A6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.96■□□□□ 0.14
LRRC40Q9H9A6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.96■□□□□ 0.14
LRRC40Q9H9A6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.96■□□□□ 0.14
LRRC40Q9H9A6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.96■□□□□ 0.14
LRRC40Q9H9A6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.96■□□□□ 0.14
LRRC40Q9H9A6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRRC40Q9H9A6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AL691403.2-201ENST00000618460 490 ntBASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 Z92544.3-201ENST00000624747 417 ntBASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AL033527.5-202ENST00000641632 1098 ntBASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AP002414.2-201ENST00000591780 3365 ntBASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 FO538757.1-201ENST00000623083 1397 ntBASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 AC023824.1-201ENST00000562945 2975 ntBASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRC40Q9H9A6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC40Q9H9A6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms