Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM4Q9C037 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM4Q9C037 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM4Q9C037 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM4Q9C037 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM4Q9C037 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM4Q9C037 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM4Q9C037 PPT1-215ENST00000641471 2368 ntBASIC15.84■□□□□ 0.13
TRIM4Q9C037 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM4Q9C037 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM4Q9C037 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM4Q9C037 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM4Q9C037 ME2P1-201ENST00000426028 1970 ntBASIC15.84■□□□□ 0.13
TRIM4Q9C037 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM4Q9C037 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM4Q9C037 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM4Q9C037 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM4Q9C037 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM4Q9C037 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM4Q9C037 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM4Q9C037 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM4Q9C037 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TRIM4Q9C037 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 AC005840.4-201ENST00000541242 2494 ntBASIC15.83■□□□□ 0.12
TRIM4Q9C037 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 IGHV3-42-201ENST00000520410 361 ntBASIC15.83■□□□□ 0.12
TRIM4Q9C037 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 AL805961.1-202ENST00000641562 540 ntBASIC15.83■□□□□ 0.12
TRIM4Q9C037 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM4Q9C037 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM4Q9C037 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AL512652.2-201ENST00000625156 1716 ntBASIC15.82■□□□□ 0.12
TRIM4Q9C037 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AL671710.1-201ENST00000610245 2349 ntBASIC15.82■□□□□ 0.12
TRIM4Q9C037 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AL627223.1-201ENST00000416693 442 ntBASIC15.82■□□□□ 0.12
TRIM4Q9C037 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AC107918.2-201ENST00000530817 355 ntBASIC15.82■□□□□ 0.12
TRIM4Q9C037 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 MPDU1-223ENST00000582151 728 ntBASIC15.82■□□□□ 0.12
TRIM4Q9C037 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM4Q9C037 AL390754.1-201ENST00000619088 582 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms