Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 AC013726.1-201ENST00000563747 2285 ntBASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 IL9RP2-201ENST00000423948 1312 ntBASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 AKAP8P1-201ENST00000434743 1349 ntBASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HDHD3Q9BSH5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 PHKG1P2-201ENST00000457537 863 ntBASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 RNA5SP416-201ENST00000516838 111 ntBASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 SLC25A1P1-201ENST00000528351 927 ntBASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 MIR600HG-201ENST00000449175 5984 ntBASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HDHD3Q9BSH5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HDHD3Q9BSH5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms