Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DUX4L46-201ENST00000566845 751 ntBASIC20.25■□□□□ 0.83
ABCA3Q99758 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC20.25■□□□□ 0.83
ABCA3Q99758 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ABCA3Q99758 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.25■□□□□ 0.83
ABCA3Q99758 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ABCA3Q99758 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.25■□□□□ 0.83
ABCA3Q99758 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.25■□□□□ 0.83
ABCA3Q99758 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ABCA3Q99758 AL157414.3-201ENST00000624276 1954 ntBASIC20.25■□□□□ 0.83
ABCA3Q99758 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 PIN4P1-201ENST00000451079 396 ntBASIC20.24■□□□□ 0.83
ABCA3Q99758 AC079112.1-201ENST00000454972 939 ntBASIC20.24■□□□□ 0.83
ABCA3Q99758 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC20.24■□□□□ 0.83
ABCA3Q99758 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.24■□□□□ 0.83
ABCA3Q99758 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ABCA3Q99758 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 AL138725.1-201ENST00000407347 1314 ntBASIC20.24■□□□□ 0.83
ABCA3Q99758 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.24■□□□□ 0.83
ABCA3Q99758 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.24■□□□□ 0.83
ABCA3Q99758 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 MIR1227-201ENST00000408484 88 ntBASIC20.24■□□□□ 0.83
ABCA3Q99758 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.24■□□□□ 0.83
ABCA3Q99758 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC20.24■□□□□ 0.83
ABCA3Q99758 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.24■□□□□ 0.83
ABCA3Q99758 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ABCA3Q99758 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ABCA3Q99758 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC20.23■□□□□ 0.83
ABCA3Q99758 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC20.23■□□□□ 0.83
ABCA3Q99758 FAM58BP-201ENST00000439056 645 ntBASIC20.23■□□□□ 0.83
ABCA3Q99758 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCA3Q99758 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ABCA3Q99758 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ABCA3Q99758 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ABCA3Q99758 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ABCA3Q99758 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.22■□□□□ 0.83
ABCA3Q99758 RN7SL258P-201ENST00000478664 300 ntBASIC20.22■□□□□ 0.83
ABCA3Q99758 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ABCA3Q99758 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 TPM1-223ENST00000560445 485 ntTSL 3 BASIC20.22■□□□□ 0.83
ABCA3Q99758 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC20.22■□□□□ 0.83
ABCA3Q99758 AC009084.3-201ENST00000623356 437 ntBASIC20.22■□□□□ 0.83
ABCA3Q99758 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCA3Q99758 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.22■□□□□ 0.83
ABCA3Q99758 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.22■□□□□ 0.83
ABCA3Q99758 AC006122.1-201ENST00000493323 440 ntBASIC20.22■□□□□ 0.83
ABCA3Q99758 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ABCA3Q99758 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 AC025262.2-201ENST00000623975 1056 ntBASIC20.22■□□□□ 0.83
ABCA3Q99758 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.22■□□□□ 0.83
ABCA3Q99758 AC006058.4-201ENST00000624016 1670 ntBASIC20.22■□□□□ 0.83
ABCA3Q99758 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms