Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.1■□□□□ 0.17
CDCA3Q99618 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
CDCA3Q99618 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDCA3Q99618 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDCA3Q99618 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.09■□□□□ 0.17
CDCA3Q99618 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.09■□□□□ 0.17
CDCA3Q99618 AC104457.1-201ENST00000401024 814 ntBASIC16.09■□□□□ 0.17
CDCA3Q99618 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDCA3Q99618 TUBB8P8-201ENST00000458717 1058 ntBASIC16.09■□□□□ 0.17
CDCA3Q99618 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 AC100850.1-201ENST00000506768 649 ntBASIC16.09■□□□□ 0.17
CDCA3Q99618 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.09■□□□□ 0.17
CDCA3Q99618 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.09■□□□□ 0.17
CDCA3Q99618 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.09■□□□□ 0.17
CDCA3Q99618 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CDCA3Q99618 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDCA3Q99618 CROCCP1-201ENST00000426910 5675 ntBASIC16.09■□□□□ 0.17
CDCA3Q99618 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDCA3Q99618 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDCA3Q99618 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CDCA3Q99618 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.08■□□□□ 0.17
CDCA3Q99618 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
CDCA3Q99618 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDCA3Q99618 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDCA3Q99618 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDCA3Q99618 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDCA3Q99618 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.08■□□□□ 0.17
CDCA3Q99618 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CDCA3Q99618 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDCA3Q99618 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.08■□□□□ 0.16
CDCA3Q99618 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.08■□□□□ 0.16
CDCA3Q99618 AC007274.2-201ENST00000421675 662 ntBASIC16.08■□□□□ 0.16
CDCA3Q99618 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCA3Q99618 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCA3Q99618 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCA3Q99618 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.08■□□□□ 0.16
CDCA3Q99618 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCA3Q99618 FTLP10-202ENST00000505798 471 ntBASIC16.08■□□□□ 0.16
CDCA3Q99618 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCA3Q99618 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCA3Q99618 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CDCA3Q99618 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCA3Q99618 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCA3Q99618 RN7SL163P-201ENST00000583100 276 ntBASIC16.08■□□□□ 0.16
CDCA3Q99618 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCA3Q99618 BNIP3P13-201ENST00000599968 566 ntBASIC16.08■□□□□ 0.16
CDCA3Q99618 AC026740.1-201ENST00000607068 791 ntBASIC16.08■□□□□ 0.16
CDCA3Q99618 U62317.3-201ENST00000608319 855 ntBASIC16.08■□□□□ 0.16
CDCA3Q99618 AC079336.7-201ENST00000623428 1078 ntBASIC16.08■□□□□ 0.16
CDCA3Q99618 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDCA3Q99618 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 AC008132.1-202ENST00000342005 1389 ntBASIC16.08■□□□□ 0.16
CDCA3Q99618 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCA3Q99618 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCA3Q99618 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CDCA3Q99618 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
CDCA3Q99618 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CDCA3Q99618 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCA3Q99618 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CDCA3Q99618 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms