Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
CCL13Q99616 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL13Q99616 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL13Q99616 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL13Q99616 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.16□□□□□ -0.3
CCL13Q99616 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 SPDYE18-201ENST00000510091 1050 ntBASIC13.16□□□□□ -0.3
CCL13Q99616 SLED1-202ENST00000512051 380 ntBASIC13.16□□□□□ -0.3
CCL13Q99616 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
CCL13Q99616 AC104794.3-201ENST00000566840 1248 ntBASIC13.16□□□□□ -0.3
CCL13Q99616 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CCL13Q99616 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL13Q99616 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL13Q99616 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL13Q99616 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL13Q99616 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL13Q99616 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL13Q99616 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL13Q99616 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL13Q99616 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCL13Q99616 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL13Q99616 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 CICP6-201ENST00000457191 2729 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL13Q99616 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.3
CCL13Q99616 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL13Q99616 RPL13P2-201ENST00000440687 659 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.15□□□□□ -0.3
CCL13Q99616 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL13Q99616 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms