Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FGD4Q96M96 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FGD4Q96M96 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
FGD4Q96M96 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
FGD4Q96M96 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FGD4Q96M96 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
FGD4Q96M96 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 AC020907.1-201ENST00000616460 1350 ntBASIC17.68■□□□□ 0.42
FGD4Q96M96 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
FGD4Q96M96 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.68■□□□□ 0.42
FGD4Q96M96 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.68■□□□□ 0.42
FGD4Q96M96 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.68■□□□□ 0.42
FGD4Q96M96 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.68■□□□□ 0.42
FGD4Q96M96 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.68■□□□□ 0.42
FGD4Q96M96 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.68■□□□□ 0.42
FGD4Q96M96 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.68■□□□□ 0.42
FGD4Q96M96 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.68■□□□□ 0.42
FGD4Q96M96 AC069224.1-201ENST00000566372 1715 ntBASIC17.68■□□□□ 0.42
FGD4Q96M96 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 MTHFR-217ENST00000641820 1569 ntBASIC17.68■□□□□ 0.42
FGD4Q96M96 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
FGD4Q96M96 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.68■□□□□ 0.42
FGD4Q96M96 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
FGD4Q96M96 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FGD4Q96M96 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.68■□□□□ 0.42
FGD4Q96M96 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.67■□□□□ 0.42
FGD4Q96M96 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.67■□□□□ 0.42
FGD4Q96M96 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.67■□□□□ 0.42
FGD4Q96M96 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
FGD4Q96M96 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FGD4Q96M96 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.67■□□□□ 0.42
FGD4Q96M96 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.67■□□□□ 0.42
FGD4Q96M96 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.67■□□□□ 0.42
FGD4Q96M96 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.67■□□□□ 0.42
FGD4Q96M96 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.67■□□□□ 0.42
FGD4Q96M96 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.67■□□□□ 0.42
FGD4Q96M96 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.67■□□□□ 0.42
FGD4Q96M96 FAM197Y7-201ENST00000432892 766 ntBASIC17.67■□□□□ 0.42
FGD4Q96M96 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.67■□□□□ 0.42
FGD4Q96M96 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.67■□□□□ 0.42
FGD4Q96M96 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.67■□□□□ 0.42
FGD4Q96M96 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.67■□□□□ 0.42
FGD4Q96M96 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.67■□□□□ 0.42
FGD4Q96M96 AL662844.4-201ENST00000606367 2838 ntBASIC17.67■□□□□ 0.42
FGD4Q96M96 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FGD4Q96M96 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
FGD4Q96M96 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 AL133338.1-201ENST00000565695 1517 ntBASIC17.67■□□□□ 0.42
FGD4Q96M96 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FGD4Q96M96 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.66■□□□□ 0.42
FGD4Q96M96 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.66■□□□□ 0.42
FGD4Q96M96 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.66■□□□□ 0.42
FGD4Q96M96 BRWD1P1-201ENST00000401091 371 ntBASIC17.66■□□□□ 0.42
FGD4Q96M96 YBX1P6-201ENST00000442962 1002 ntBASIC17.66■□□□□ 0.42
FGD4Q96M96 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FGD4Q96M96 FAM86HP-204ENST00000513466 959 ntBASIC17.66■□□□□ 0.42
FGD4Q96M96 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
FGD4Q96M96 AC078819.1-201ENST00000547454 765 ntBASIC17.66■□□□□ 0.42
FGD4Q96M96 AC012085.1-201ENST00000548270 765 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms