Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 AL353770.1-201ENST00000614915 403 ntBASIC18.08■□□□□ 0.48
CDCA5Q96FF9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDCA5Q96FF9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 AC073352.2-201ENST00000609385 439 ntBASIC18.07■□□□□ 0.48
CDCA5Q96FF9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDCA5Q96FF9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 AC114501.1-201ENST00000445949 172 ntBASIC18.06■□□□□ 0.48
CDCA5Q96FF9 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 RN7SL163P-201ENST00000583100 276 ntBASIC18.06■□□□□ 0.48
CDCA5Q96FF9 AC020922.3-201ENST00000595064 547 ntBASIC18.06■□□□□ 0.48
CDCA5Q96FF9 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDCA5Q96FF9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 FGFR3P1-201ENST00000449999 601 ntBASIC18.05■□□□□ 0.48
CDCA5Q96FF9 CEP164P1-201ENST00000455142 418 ntBASIC18.05■□□□□ 0.48
CDCA5Q96FF9 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 MARK2P5-201ENST00000507649 634 ntBASIC18.05■□□□□ 0.48
CDCA5Q96FF9 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.05■□□□□ 0.48
CDCA5Q96FF9 AC022616.1-201ENST00000518688 554 ntBASIC18.05■□□□□ 0.48
CDCA5Q96FF9 AC103988.2-201ENST00000561804 725 ntBASIC18.05■□□□□ 0.48
CDCA5Q96FF9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms