Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AP002490.2-201ENST00000524791 560 ntBASIC14.52□□□□□ -0.09
HPS1Q92902 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.52□□□□□ -0.09
HPS1Q92902 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.52□□□□□ -0.09
HPS1Q92902 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.52□□□□□ -0.09
HPS1Q92902 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HPS1Q92902 AP001160.2-201ENST00000596071 487 ntBASIC14.52□□□□□ -0.09
HPS1Q92902 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HPS1Q92902 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HPS1Q92902 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HPS1Q92902 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.52□□□□□ -0.09
HPS1Q92902 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HPS1Q92902 EGFEM1P-202ENST00000431685 1563 ntBASIC14.51□□□□□ -0.09
HPS1Q92902 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.51□□□□□ -0.09
HPS1Q92902 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 AC112504.1-201ENST00000623415 1841 ntBASIC14.51□□□□□ -0.09
HPS1Q92902 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HPS1Q92902 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HPS1Q92902 AC010740.1-201ENST00000417035 684 ntBASIC14.51□□□□□ -0.09
HPS1Q92902 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.51□□□□□ -0.09
HPS1Q92902 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 IGHV3-65-201ENST00000523210 341 ntBASIC14.51□□□□□ -0.09
HPS1Q92902 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.51□□□□□ -0.09
HPS1Q92902 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.51□□□□□ -0.09
HPS1Q92902 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
HPS1Q92902 RN7SL371P-201ENST00000578099 267 ntBASIC14.51□□□□□ -0.09
HPS1Q92902 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 AL805961.1-202ENST00000641562 540 ntBASIC14.51□□□□□ -0.09
HPS1Q92902 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HPS1Q92902 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.51□□□□□ -0.09
HPS1Q92902 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.51□□□□□ -0.09
HPS1Q92902 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
HPS1Q92902 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HPS1Q92902 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HPS1Q92902 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HPS1Q92902 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.5□□□□□ -0.09
HPS1Q92902 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HPS1Q92902 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HPS1Q92902 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.5□□□□□ -0.09
HPS1Q92902 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HPS1Q92902 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 TMBIM7P-203ENST00000641617 1718 ntBASIC14.5□□□□□ -0.09
HPS1Q92902 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HPS1Q92902 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.5□□□□□ -0.09
HPS1Q92902 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HPS1Q92902 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.5□□□□□ -0.09
HPS1Q92902 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HPS1Q92902 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 AP002414.1-201ENST00000391405 1147 ntBASIC14.5□□□□□ -0.09
HPS1Q92902 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HPS1Q92902 ELK2BP-201ENST00000415014 1224 ntBASIC14.5□□□□□ -0.09
HPS1Q92902 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.5□□□□□ -0.09
HPS1Q92902 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.5□□□□□ -0.09
HPS1Q92902 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms