Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 YBX2P1-201ENST00000394192 760 ntBASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 AL671277.1-201ENST00000429656 993 ntBASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 AC092902.6-201ENST00000641783 218 ntBASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 AC007686.3-201ENST00000619017 3487 ntBASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTN4IP1Q8WWV3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 MKNK2P1-201ENST00000437526 628 ntBASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 ACTG1P14-201ENST00000446382 1122 ntBASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 RN7SL589P-201ENST00000481268 310 ntBASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 AL135744.1-201ENST00000565098 629 ntBASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTN4IP1Q8WWV3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 AC134407.2-201ENST00000625089 1978 ntBASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 AGAP7P-201ENST00000582299 2062 ntBASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 AGAP14-201ENST00000624701 2060 ntBASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 AC013726.1-201ENST00000563747 2285 ntBASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms