Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.97■□□□□ 0.15
PRUNE2Q8WUY3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 CR383656.3-201ENST00000551315 183 ntBASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 AC084781.1-201ENST00000613737 656 ntBASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 AC020910.5-201ENST00000623668 1865 ntBASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 HLA-J-204ENST00000495278 958 ntBASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.96■□□□□ 0.15
PRUNE2Q8WUY3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 AL139094.1-201ENST00000405549 1188 ntBASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 LINC00634-202ENST00000505157 222 ntBASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
PRUNE2Q8WUY3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 KRT8P14-201ENST00000414254 1442 ntBASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 AC005915.1-201ENST00000624912 2018 ntBASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 MRPL22P1-201ENST00000505398 616 ntBASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 AC009955.4-201ENST00000597192 544 ntBASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 AC078925.2-201ENST00000624013 1973 ntBASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 AC105020.1-201ENST00000435356 2205 ntBASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 HLA-DPA2-205ENST00000433582 733 ntBASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRUNE2Q8WUY3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 AC013726.1-201ENST00000563747 2285 ntBASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms