Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CT55Q8WUE5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CT55Q8WUE5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 LINC02447-202ENST00000501888 2146 ntBASIC14.51□□□□□ -0.09
CT55Q8WUE5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 FAM86HP-204ENST00000513466 959 ntBASIC14.51□□□□□ -0.09
CT55Q8WUE5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 AL606495.2-201ENST00000605867 535 ntBASIC14.51□□□□□ -0.09
CT55Q8WUE5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CT55Q8WUE5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CT55Q8WUE5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 MIR326-201ENST00000362220 95 ntBASIC14.5□□□□□ -0.09
CT55Q8WUE5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 KLF2P2-201ENST00000416807 1039 ntBASIC14.5□□□□□ -0.09
CT55Q8WUE5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.5□□□□□ -0.09
CT55Q8WUE5 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 AC132938.4-201ENST00000623835 848 ntBASIC14.5□□□□□ -0.09
CT55Q8WUE5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CT55Q8WUE5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CT55Q8WUE5 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms