Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AC134915.1-201ENST00000426461 574 ntBASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 TDH-203ENST00000531764 1110 ntBASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AL033527.4-201ENST00000641026 673 ntBASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AL607033.1-201ENST00000623900 1599 ntBASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 VDAC1P7-201ENST00000462417 847 ntBASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 AL049840.4-201ENST00000602422 811 ntBASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SHKBP1Q8TBC3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHKBP1Q8TBC3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHKBP1Q8TBC3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHKBP1Q8TBC3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.46■□□□□ 0.22
SHKBP1Q8TBC3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHKBP1Q8TBC3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AC006449.6-201ENST00000612330 2296 ntBASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 PDIA3P1-201ENST00000471856 1510 ntBASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 BNIP3P42-201ENST00000454982 569 ntBASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 AC120045.2-201ENST00000567334 178 ntBASIC16.45■□□□□ 0.22
SHKBP1Q8TBC3 BNIP3P29-201ENST00000598302 571 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms