Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 AC004461.2-201ENST00000629517 803 ntBASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 AL136982.4-201ENST00000437689 1740 ntBASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLDND2Q8NHS1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 GK-202ENST00000378941 458 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 KRT17P7-201ENST00000451704 1104 ntBASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SRD5A3P1-201ENST00000603021 949 ntBASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 AL391825.1-201ENST00000457671 1364 ntBASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CYP4F24P-201ENST00000586049 1580 ntBASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDND2Q8NHS1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CLDND2Q8NHS1 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.39□□□□□ -0.27
CLDND2Q8NHS1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CLDND2Q8NHS1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDND2Q8NHS1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CLDND2Q8NHS1 CU639417.3-201ENST00000624240 1404 ntBASIC13.39□□□□□ -0.27
CLDND2Q8NHS1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDND2Q8NHS1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CLDND2Q8NHS1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms