Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL22A1Q8NFW1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL22A1Q8NFW1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL22A1Q8NFW1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.29■□□□□ 0.84
COL22A1Q8NFW1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL22A1Q8NFW1 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL22A1Q8NFW1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL22A1Q8NFW1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL22A1Q8NFW1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 AC006058.4-201ENST00000624016 1670 ntBASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 AC006122.1-201ENST00000493323 440 ntBASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 ALG1L6P-201ENST00000515248 758 ntBASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL22A1Q8NFW1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 AC005041.3-201ENST00000606287 649 ntBASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 AC124067.4-201ENST00000519691 2379 ntBASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.27■□□□□ 0.84
COL22A1Q8NFW1 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 AC026434.2-201ENST00000506094 1078 ntBASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 EIF5AP2-201ENST00000585668 1047 ntBASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 AP003392.6-201ENST00000607709 325 ntBASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 AC107464.3-201ENST00000609172 737 ntBASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 LINC01165-201ENST00000445190 1623 ntBASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
COL22A1Q8NFW1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 AL157407.1-201ENST00000435784 904 ntBASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 DUTP3-201ENST00000450025 415 ntBASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 FTH1P22-201ENST00000456305 520 ntBASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 AP001527.2-201ENST00000614441 631 ntBASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL22A1Q8NFW1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms