Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 AC002056.1-201ENST00000395613 760 ntBASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 AC009078.2-202ENST00000463353 338 ntBASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 PRYP6-201ENST00000514804 343 ntBASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 AC068137.2-201ENST00000605408 478 ntBASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 AP001282.1-201ENST00000531301 1499 ntBASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 CICP4-201ENST00000447359 2812 ntBASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.9□□□□□ -0.18
DNAAF1Q8NEP3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
DNAAF1Q8NEP3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
DNAAF1Q8NEP3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.9□□□□□ -0.19
DNAAF1Q8NEP3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.9□□□□□ -0.19
DNAAF1Q8NEP3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AGAP7P-201ENST00000582299 2062 ntBASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AGAP14-201ENST00000624701 2060 ntBASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AC139749.1-202ENST00000617529 3139 ntBASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 AC104581.4-201ENST00000623126 3052 ntBASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DNAAF1Q8NEP3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DNAAF1Q8NEP3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms