Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 BTBD7P1-201ENST00000447253 1453 ntBASIC15.02■□□□□ -0
SRFBP1Q8NEF9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 DUX4L27-201ENST00000554796 1261 ntBASIC15.02■□□□□ -0
SRFBP1Q8NEF9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 AC093512.1-201ENST00000617969 520 ntBASIC15.02■□□□□ -0
SRFBP1Q8NEF9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SRFBP1Q8NEF9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SRFBP1Q8NEF9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 AC087481.3-201ENST00000602886 1894 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 TMBIM7P-203ENST00000641617 1718 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 BASP1P1-201ENST00000430708 665 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 AL512638.1-201ENST00000457493 794 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 SLED1-202ENST00000512051 380 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 RFPL4AP1-201ENST00000530883 850 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 AC106028.4-201ENST00000614509 607 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 AC127383.1-201ENST00000444697 1800 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 AC105250.1-201ENST00000509378 2057 ntBASIC15.01□□□□□ -0.01
SRFBP1Q8NEF9 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15□□□□□ -0.01
SRFBP1Q8NEF9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms