Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 DFFBP1-201ENST00000433250 979 ntBASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 AC245100.5-201ENST00000452108 331 ntBASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 AC008494.3-201ENST00000606615 944 ntBASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC33Q8N5R6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 BTBD7P1-201ENST00000447253 1453 ntBASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 AC092384.3-202ENST00000564646 2873 ntBASIC16.52■□□□□ 0.23
CCDC33Q8N5R6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 U91328.1-201ENST00000437528 223 ntBASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 ATP5G2P4-201ENST00000442175 420 ntBASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 INE1-201ENST00000456273 945 ntBASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC33Q8N5R6 AC073347.1-201ENST00000421633 2643 ntBASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 AC098614.1-201ENST00000368528 745 ntBASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 SERBP1P3-201ENST00000459980 809 ntBASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 RN7SL752P-201ENST00000463779 287 ntBASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 ZNF890P-202ENST00000530367 1156 ntBASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 WASH4P-201ENST00000564273 1246 ntBASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC33Q8N5R6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms