Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEFF1Q8IYR6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 AC006001.1-201ENST00000325130 474 ntBASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 BTBD6P1-201ENST00000412176 1267 ntBASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 SLC25A24P2-201ENST00000415059 510 ntBASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 AC007969.1-201ENST00000433675 447 ntBASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 KRT18P25-201ENST00000508931 1278 ntBASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 RHOQP1-201ENST00000555758 579 ntBASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEFF1Q8IYR6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TMEFF1Q8IYR6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 AHCYP2-201ENST00000430630 1300 ntBASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 IGHJ2P-201ENST00000454480 60 ntBASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 AL021578.1-201ENST00000613646 709 ntBASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 AP005019.2-201ENST00000615104 511 ntBASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 AL118508.1-201ENST00000613502 2345 ntBASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEFF1Q8IYR6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms