Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 RN7SL818P-201ENST00000485099 259 ntBASIC21.67■■□□□ 1.06
UBR1Q8IWV7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 DNM1P30-201ENST00000563586 452 ntBASIC21.67■■□□□ 1.06
UBR1Q8IWV7 MIR4649-201ENST00000582839 64 ntBASIC21.67■■□□□ 1.06
UBR1Q8IWV7 RN7SL725P-201ENST00000606439 259 ntBASIC21.67■■□□□ 1.06
UBR1Q8IWV7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 FAM58BP-201ENST00000439056 645 ntBASIC21.66■■□□□ 1.06
UBR1Q8IWV7 PUDPP3-201ENST00000445368 636 ntBASIC21.66■■□□□ 1.06
UBR1Q8IWV7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 AC026803.1-201ENST00000569130 274 ntBASIC21.66■■□□□ 1.06
UBR1Q8IWV7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 AC005357.2-202ENST00000590507 1060 ntBASIC21.66■■□□□ 1.06
UBR1Q8IWV7 AL109837.1-201ENST00000603272 613 ntBASIC21.66■■□□□ 1.06
UBR1Q8IWV7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 AP002803.1-201ENST00000528836 498 ntBASIC21.66■■□□□ 1.06
UBR1Q8IWV7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC21.66■■□□□ 1.06
UBR1Q8IWV7 AC008805.1-201ENST00000590892 364 ntBASIC21.66■■□□□ 1.06
UBR1Q8IWV7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 RPL18AP3-201ENST00000462885 528 ntBASIC21.65■■□□□ 1.06
UBR1Q8IWV7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBR1Q8IWV7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 RN7SKP230-201ENST00000365642 335 ntBASIC21.64■■□□□ 1.06
UBR1Q8IWV7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 AC141586.1-203ENST00000567242 366 ntBASIC21.64■■□□□ 1.06
UBR1Q8IWV7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.64■■□□□ 1.06
UBR1Q8IWV7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 AC020916.1-201ENST00000587762 1774 ntBASIC21.64■■□□□ 1.05
UBR1Q8IWV7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 CYP51A1P3-201ENST00000400072 1428 ntBASIC21.64■■□□□ 1.05
UBR1Q8IWV7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 AGGF1P2-201ENST00000426656 2106 ntBASIC21.64■■□□□ 1.05
UBR1Q8IWV7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
UBR1Q8IWV7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBR1Q8IWV7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBR1Q8IWV7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBR1Q8IWV7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBR1Q8IWV7 RN7SL258P-201ENST00000478664 300 ntBASIC21.63■■□□□ 1.05
UBR1Q8IWV7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBR1Q8IWV7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms