Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
APLFQ8IW19 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 AC020658.6-201ENST00000623564 1870 ntBASIC15.68■□□□□ 0.1
APLFQ8IW19 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.68■□□□□ 0.1
APLFQ8IW19 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.68■□□□□ 0.1
APLFQ8IW19 MIR943-201ENST00000401286 94 ntBASIC15.68■□□□□ 0.1
APLFQ8IW19 SPDYE7P-202ENST00000420373 878 ntBASIC15.68■□□□□ 0.1
APLFQ8IW19 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.68■□□□□ 0.1
APLFQ8IW19 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APLFQ8IW19 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.68■□□□□ 0.1
APLFQ8IW19 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.68■□□□□ 0.1
APLFQ8IW19 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.68■□□□□ 0.1
APLFQ8IW19 LINC01225-203ENST00000563550 1244 ntBASIC15.68■□□□□ 0.1
APLFQ8IW19 AC140878.1-201ENST00000565277 250 ntBASIC15.68■□□□□ 0.1
APLFQ8IW19 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.68■□□□□ 0.1
APLFQ8IW19 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
APLFQ8IW19 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
APLFQ8IW19 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
APLFQ8IW19 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 AC012569.1-201ENST00000591191 1524 ntBASIC15.68■□□□□ 0.1
APLFQ8IW19 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.68■□□□□ 0.1
APLFQ8IW19 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APLFQ8IW19 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.68■□□□□ 0.1
APLFQ8IW19 AC013726.1-201ENST00000563747 2285 ntBASIC15.68■□□□□ 0.1
APLFQ8IW19 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APLFQ8IW19 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.67■□□□□ 0.1
APLFQ8IW19 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APLFQ8IW19 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.67■□□□□ 0.1
APLFQ8IW19 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.67■□□□□ 0.1
APLFQ8IW19 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.67■□□□□ 0.1
APLFQ8IW19 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.67■□□□□ 0.1
APLFQ8IW19 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 FLJ16779-201ENST00000612722 7638 ntBASIC15.67■□□□□ 0.1
APLFQ8IW19 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 LINC00552-201ENST00000625151 2579 ntBASIC15.67■□□□□ 0.1
APLFQ8IW19 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
APLFQ8IW19 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APLFQ8IW19 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APLFQ8IW19 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.67■□□□□ 0.1
APLFQ8IW19 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
APLFQ8IW19 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms