Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 AC007551.1-201ENST00000457394 519 ntBASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 AC093813.1-201ENST00000605066 256 ntBASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 AC134312.5-201ENST00000568031 1313 ntBASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 AC069224.1-201ENST00000566372 1715 ntBASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC62Q6P9F0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 CSF2RBP1-201ENST00000447905 391 ntBASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 FO681548.1-201ENST00000455617 1132 ntBASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 AC107373.2-201ENST00000607735 490 ntBASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC62Q6P9F0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC62Q6P9F0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CCDC62Q6P9F0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC62Q6P9F0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC62Q6P9F0 AL662844.4-201ENST00000606367 2838 ntBASIC17.58■□□□□ 0.41
CCDC62Q6P9F0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC62Q6P9F0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CCDC62Q6P9F0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC62Q6P9F0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 AL355864.2-201ENST00000447420 863 ntBASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 FTH1P14-201ENST00000482930 551 ntBASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 AC022137.2-201ENST00000503482 481 ntBASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 AC106760.1-201ENST00000508690 800 ntBASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC62Q6P9F0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms