Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF43Q68DV7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF43Q68DV7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 AC007541.1-201ENST00000570282 1469 ntBASIC16.5■□□□□ 0.23
RNF43Q68DV7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 RPS2P32-201ENST00000439199 892 ntBASIC16.5■□□□□ 0.23
RNF43Q68DV7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 AL132655.2-201ENST00000596276 594 ntBASIC16.5■□□□□ 0.23
RNF43Q68DV7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.5■□□□□ 0.23
RNF43Q68DV7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF43Q68DV7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF43Q68DV7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF43Q68DV7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF43Q68DV7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 AC006486.2-201ENST00000624246 2199 ntBASIC16.48■□□□□ 0.23
RNF43Q68DV7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF43Q68DV7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF43Q68DV7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms