Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.28■□□□□ 0.2
LRRC38Q5VT99 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 AL645728.2-202ENST00000641679 227 ntBASIC16.28■□□□□ 0.2
LRRC38Q5VT99 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC38Q5VT99 AC013726.1-201ENST00000563747 2285 ntBASIC16.28■□□□□ 0.2
LRRC38Q5VT99 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 FAM45BP-202ENST00000592932 1624 ntBASIC16.27■□□□□ 0.2
LRRC38Q5VT99 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 TOMM22P5-201ENST00000416399 439 ntBASIC16.27■□□□□ 0.2
LRRC38Q5VT99 AC015922.1-201ENST00000421102 1152 ntBASIC16.27■□□□□ 0.2
LRRC38Q5VT99 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 AC015911.4-201ENST00000588022 1070 ntBASIC16.27■□□□□ 0.2
LRRC38Q5VT99 AC011467.4-201ENST00000594891 528 ntBASIC16.27■□□□□ 0.2
LRRC38Q5VT99 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.27■□□□□ 0.2
LRRC38Q5VT99 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC38Q5VT99 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 AL513477.1-201ENST00000602865 2407 ntBASIC16.27■□□□□ 0.19
LRRC38Q5VT99 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.27■□□□□ 0.19
LRRC38Q5VT99 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 KRT18P64-201ENST00000434946 1219 ntBASIC16.26■□□□□ 0.19
LRRC38Q5VT99 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 CNN2P2-201ENST00000443536 909 ntBASIC16.26■□□□□ 0.19
LRRC38Q5VT99 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 CNN2P3-201ENST00000450201 906 ntBASIC16.26■□□□□ 0.19
LRRC38Q5VT99 AC109322.1-201ENST00000524499 1264 ntBASIC16.26■□□□□ 0.19
LRRC38Q5VT99 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC38Q5VT99 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms