Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 AC104794.3-201ENST00000566840 1248 ntBASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTPN20Q4JDL3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 SRD5A3P1-201ENST00000603021 949 ntBASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 DBET-201ENST00000630918 3363 ntBASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN20Q4JDL3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 MIR770-201ENST00000390219 98 ntBASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 AL133267.1-201ENST00000398220 340 ntBASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 KRT18P43-201ENST00000469825 1281 ntBASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 AL391069.4-201ENST00000609583 481 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms