Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.67□□□□□ -0.06
RFX4Q33E94 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.67□□□□□ -0.06
RFX4Q33E94 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.67□□□□□ -0.06
RFX4Q33E94 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.67□□□□□ -0.06
RFX4Q33E94 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.67□□□□□ -0.06
RFX4Q33E94 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.67□□□□□ -0.06
RFX4Q33E94 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RFX4Q33E94 AL078644.1-201ENST00000609881 752 ntBASIC14.67□□□□□ -0.06
RFX4Q33E94 MIR7706-201ENST00000613747 67 ntBASIC14.67□□□□□ -0.06
RFX4Q33E94 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RFX4Q33E94 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.67□□□□□ -0.06
RFX4Q33E94 AC116407.3-201ENST00000623905 1129 ntBASIC14.67□□□□□ -0.06
RFX4Q33E94 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.67□□□□□ -0.06
RFX4Q33E94 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFX4Q33E94 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.66□□□□□ -0.06
RFX4Q33E94 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RFX4Q33E94 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.66□□□□□ -0.06
RFX4Q33E94 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.66□□□□□ -0.06
RFX4Q33E94 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.66□□□□□ -0.06
RFX4Q33E94 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.66□□□□□ -0.06
RFX4Q33E94 AC004870.1-201ENST00000315132 882 ntBASIC14.66□□□□□ -0.06
RFX4Q33E94 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.66□□□□□ -0.06
RFX4Q33E94 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.66□□□□□ -0.06
RFX4Q33E94 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RFX4Q33E94 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.66□□□□□ -0.06
RFX4Q33E94 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.66□□□□□ -0.06
RFX4Q33E94 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.66□□□□□ -0.06
RFX4Q33E94 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.66□□□□□ -0.06
RFX4Q33E94 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.66□□□□□ -0.06
RFX4Q33E94 RN7SL510P-201ENST00000581311 263 ntBASIC14.66□□□□□ -0.06
RFX4Q33E94 AC007064.4-201ENST00000637740 555 ntBASIC14.66□□□□□ -0.06
RFX4Q33E94 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RFX4Q33E94 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.66□□□□□ -0.06
RFX4Q33E94 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RFX4Q33E94 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.66□□□□□ -0.06
RFX4Q33E94 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.66□□□□□ -0.06
RFX4Q33E94 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RFX4Q33E94 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.65□□□□□ -0.06
RFX4Q33E94 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
RFX4Q33E94 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.65□□□□□ -0.06
RFX4Q33E94 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.65□□□□□ -0.06
RFX4Q33E94 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RFX4Q33E94 FAAHP1-202ENST00000446499 1238 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms