Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MTX1P1-201ENST00000440904 838 ntBASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 RN7SL48P-201ENST00000579283 293 ntBASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 AL096828.3-201ENST00000615354 462 ntBASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 MTHFR-217ENST00000641820 1569 ntBASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM71Q2Q1W2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AC018735.1-201ENST00000437208 1502 ntBASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 CNN2P10-201ENST00000443067 918 ntBASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AC104982.3-201ENST00000581995 514 ntBASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM71Q2Q1W2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TRIM71Q2Q1W2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM71Q2Q1W2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
TRIM71Q2Q1W2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM71Q2Q1W2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM71Q2Q1W2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM71Q2Q1W2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM71Q2Q1W2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.96■□□□□ 0.3
TRIM71Q2Q1W2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 AC004898.1-201ENST00000451057 766 ntBASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 RHOQP1-201ENST00000555758 579 ntBASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 AD000864.1-201ENST00000624076 2295 ntBASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM71Q2Q1W2 AC099398.1-201ENST00000567919 2776 ntBASIC16.94■□□□□ 0.3
TRIM71Q2Q1W2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms