Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.46■□□□□ 0.87
RIPK4P57078 INE1-201ENST00000456273 945 ntBASIC20.46■□□□□ 0.87
RIPK4P57078 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.46■□□□□ 0.87
RIPK4P57078 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.46■□□□□ 0.87
RIPK4P57078 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.46■□□□□ 0.87
RIPK4P57078 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.46■□□□□ 0.87
RIPK4P57078 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.46■□□□□ 0.87
RIPK4P57078 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RIPK4P57078 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RIPK4P57078 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC20.46■□□□□ 0.87
RIPK4P57078 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.46■□□□□ 0.87
RIPK4P57078 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.46■□□□□ 0.87
RIPK4P57078 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.46■□□□□ 0.87
RIPK4P57078 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.46■□□□□ 0.87
RIPK4P57078 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RIPK4P57078 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RIPK4P57078 DRD5P1-201ENST00000456605 1438 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 HYMAI-201ENST00000635591 3347 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RIPK4P57078 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.45■□□□□ 0.86
RIPK4P57078 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RIPK4P57078 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.45■□□□□ 0.86
RIPK4P57078 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.45■□□□□ 0.86
RIPK4P57078 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.45■□□□□ 0.86
RIPK4P57078 AC134915.1-201ENST00000426461 574 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 AC005034.1-201ENST00000426657 489 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.45■□□□□ 0.86
RIPK4P57078 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.45■□□□□ 0.86
RIPK4P57078 GAPDHP21-201ENST00000450301 1010 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.45■□□□□ 0.86
RIPK4P57078 AC025181.2-201ENST00000606994 802 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.45■□□□□ 0.86
RIPK4P57078 AL035252.4-201ENST00000624174 288 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RIPK4P57078 AL033527.5-201ENST00000641382 801 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
RIPK4P57078 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.45■□□□□ 0.86
RIPK4P57078 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC20.45■□□□□ 0.86
RIPK4P57078 AC020658.6-201ENST00000623564 1870 ntBASIC20.45■□□□□ 0.86
RIPK4P57078 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RIPK4P57078 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 INTS4P2-202ENST00000614726 2019 ntBASIC20.44■□□□□ 0.86
RIPK4P57078 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RIPK4P57078 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.44■□□□□ 0.86
RIPK4P57078 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC20.44■□□□□ 0.86
RIPK4P57078 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
RIPK4P57078 AC132938.2-201ENST00000579188 680 ntBASIC20.44■□□□□ 0.86
RIPK4P57078 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RIPK4P57078 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RIPK4P57078 AL591163.1-201ENST00000641757 987 ntBASIC20.44■□□□□ 0.86
RIPK4P57078 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RIPK4P57078 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RIPK4P57078 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RIPK4P57078 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
RIPK4P57078 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms