Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLDN12P56749 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLDN12P56749 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN12P56749 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN12P56749 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN12P56749 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CLDN12P56749 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 AC092474.2-201ENST00000424288 719 ntBASIC13.72□□□□□ -0.21
CLDN12P56749 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 PRYP6-201ENST00000514804 343 ntBASIC13.72□□□□□ -0.21
CLDN12P56749 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN12P56749 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN12P56749 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN12P56749 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 TP73-AS1-207ENST00000624167 988 ntBASIC13.72□□□□□ -0.21
CLDN12P56749 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.72□□□□□ -0.21
CLDN12P56749 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
CLDN12P56749 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN12P56749 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN12P56749 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN12P56749 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN12P56749 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLDN12P56749 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLDN12P56749 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLDN12P56749 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLDN12P56749 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN12P56749 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CLDN12P56749 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.71□□□□□ -0.21
CLDN12P56749 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CLDN12P56749 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN12P56749 IGLL3P-201ENST00000412472 434 ntBASIC13.71□□□□□ -0.21
CLDN12P56749 UPK3BP1-201ENST00000428678 509 ntBASIC13.71□□□□□ -0.21
CLDN12P56749 PRSS29P-201ENST00000440800 595 ntBASIC13.71□□□□□ -0.21
CLDN12P56749 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms