Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 FAM8A3P-201ENST00000427218 844 ntBASIC14.85□□□□□ -0.03
WNT3P56703 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 TARDBPP1-201ENST00000442013 1203 ntBASIC14.85□□□□□ -0.03
WNT3P56703 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 BCRP1-201ENST00000444246 691 ntBASIC14.85□□□□□ -0.03
WNT3P56703 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.85□□□□□ -0.03
WNT3P56703 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.85□□□□□ -0.03
WNT3P56703 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.85□□□□□ -0.03
WNT3P56703 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
WNT3P56703 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.85□□□□□ -0.03
WNT3P56703 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.85□□□□□ -0.03
WNT3P56703 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.85□□□□□ -0.03
WNT3P56703 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
WNT3P56703 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
WNT3P56703 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 AC013726.1-201ENST00000563747 2285 ntBASIC14.84□□□□□ -0.03
WNT3P56703 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.84□□□□□ -0.03
WNT3P56703 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.84□□□□□ -0.03
WNT3P56703 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 AC093214.1-201ENST00000511688 1107 ntBASIC14.84□□□□□ -0.03
WNT3P56703 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.84□□□□□ -0.03
WNT3P56703 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.84□□□□□ -0.03
WNT3P56703 SPCS2P1-201ENST00000561636 679 ntBASIC14.84□□□□□ -0.03
WNT3P56703 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 AC003101.2-201ENST00000612557 442 ntBASIC14.84□□□□□ -0.03
WNT3P56703 AC007967.4-201ENST00000614700 386 ntBASIC14.84□□□□□ -0.03
WNT3P56703 MIR6080-201ENST00000617359 66 ntBASIC14.84□□□□□ -0.03
WNT3P56703 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 AC084364.1-201ENST00000551967 1556 ntBASIC14.84□□□□□ -0.03
WNT3P56703 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 TUBB3P1-201ENST00000405796 1332 ntBASIC14.84□□□□□ -0.03
WNT3P56703 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 KRT8P12-202ENST00000472924 1397 ntBASIC14.84□□□□□ -0.03
WNT3P56703 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
WNT3P56703 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.84□□□□□ -0.03
WNT3P56703 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.83□□□□□ -0.03
WNT3P56703 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.83□□□□□ -0.03
WNT3P56703 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
WNT3P56703 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
WNT3P56703 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
WNT3P56703 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3P56703 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3P56703 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3P56703 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3P56703 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
WNT3P56703 MROH4P-201ENST00000431302 1578 ntBASIC14.83□□□□□ -0.04
WNT3P56703 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms