Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDH11P55287 AL139400.1-201ENST00000366220 510 ntBASIC14.47□□□□□ -0.09
CDH11P55287 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 AL592309.1-201ENST00000443127 649 ntBASIC14.47□□□□□ -0.09
CDH11P55287 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 KRT18P34-201ENST00000488218 1270 ntBASIC14.47□□□□□ -0.09
CDH11P55287 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH11P55287 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
CDH11P55287 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH11P55287 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH11P55287 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH11P55287 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH11P55287 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 LINC00628-201ENST00000628516 1289 ntBASIC14.47□□□□□ -0.09
CDH11P55287 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH11P55287 CICP24-201ENST00000605464 2705 ntBASIC14.47□□□□□ -0.09
CDH11P55287 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH11P55287 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDH11P55287 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH11P55287 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH11P55287 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH11P55287 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CDH11P55287 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH11P55287 KRT18P32-201ENST00000424695 1287 ntBASIC14.46□□□□□ -0.09
CDH11P55287 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH11P55287 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 AC079140.1-201ENST00000508039 487 ntBASIC14.46□□□□□ -0.09
CDH11P55287 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 IGHV3-62-201ENST00000520057 340 ntBASIC14.46□□□□□ -0.09
CDH11P55287 AC109635.5-201ENST00000533593 962 ntBASIC14.46□□□□□ -0.09
CDH11P55287 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH11P55287 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.46□□□□□ -0.09
CDH11P55287 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH11P55287 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 AC025678.2-201ENST00000562061 970 ntBASIC14.46□□□□□ -0.09
CDH11P55287 AC009093.7-201ENST00000623853 1223 ntBASIC14.46□□□□□ -0.09
CDH11P55287 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH11P55287 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH11P55287 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH11P55287 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.46□□□□□ -0.1
CDH11P55287 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH11P55287 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CDH11P55287 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH11P55287 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.46□□□□□ -0.1
CDH11P55287 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CDH11P55287 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms