Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.98■□□□□ 0.15
CDH4P55283 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDH4P55283 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDH4P55283 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH4P55283 COX5BP8-201ENST00000416911 349 ntBASIC15.98■□□□□ 0.15
CDH4P55283 NME2P1-201ENST00000426182 414 ntBASIC15.98■□□□□ 0.15
CDH4P55283 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.98■□□□□ 0.15
CDH4P55283 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 VDAC1P7-201ENST00000462417 847 ntBASIC15.98■□□□□ 0.15
CDH4P55283 RN7SL752P-201ENST00000463779 287 ntBASIC15.98■□□□□ 0.15
CDH4P55283 AC011495.1-201ENST00000498085 584 ntBASIC15.98■□□□□ 0.15
CDH4P55283 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDH4P55283 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH4P55283 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.98■□□□□ 0.15
CDH4P55283 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH4P55283 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.98■□□□□ 0.15
CDH4P55283 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 AC092850.2-201ENST00000623821 2697 ntBASIC15.98■□□□□ 0.15
CDH4P55283 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH4P55283 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CDH4P55283 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH4P55283 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CDH4P55283 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 RPL5P21-201ENST00000404620 815 ntBASIC15.97■□□□□ 0.15
CDH4P55283 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.97■□□□□ 0.15
CDH4P55283 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 AC026410.3-201ENST00000514280 936 ntBASIC15.97■□□□□ 0.15
CDH4P55283 CR383656.12-201ENST00000549567 513 ntBASIC15.97■□□□□ 0.15
CDH4P55283 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CDH4P55283 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CDH4P55283 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH4P55283 AL359711.2-201ENST00000563105 872 ntBASIC15.97■□□□□ 0.15
CDH4P55283 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CDH4P55283 AC025181.2-201ENST00000606994 802 ntBASIC15.97■□□□□ 0.15
CDH4P55283 AL033527.5-201ENST00000641382 801 ntBASIC15.97■□□□□ 0.15
CDH4P55283 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CDH4P55283 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH4P55283 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 AC009090.5-201ENST00000624886 2285 ntBASIC15.97■□□□□ 0.15
CDH4P55283 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH4P55283 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH4P55283 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH4P55283 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDH4P55283 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CDH4P55283 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH4P55283 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH4P55283 AC090616.6-203ENST00000579186 1945 ntBASIC15.96■□□□□ 0.15
CDH4P55283 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms