Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.66■□□□□ 0.26
CACNA2D1P54289 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CACNA2D1P54289 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 AL391825.1-201ENST00000457671 1364 ntBASIC16.65■□□□□ 0.26
CACNA2D1P54289 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 ELK1P1-201ENST00000485699 580 ntBASIC16.65■□□□□ 0.26
CACNA2D1P54289 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 AC123567.1-201ENST00000548294 1261 ntBASIC16.65■□□□□ 0.26
CACNA2D1P54289 RARRES2P5-201ENST00000564013 466 ntBASIC16.65■□□□□ 0.26
CACNA2D1P54289 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 AC099568.2-201ENST00000609194 695 ntBASIC16.65■□□□□ 0.26
CACNA2D1P54289 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CACNA2D1P54289 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CACNA2D1P54289 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.64■□□□□ 0.26
CACNA2D1P54289 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 TOMM22P5-201ENST00000416399 439 ntBASIC16.64■□□□□ 0.25
CACNA2D1P54289 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.64■□□□□ 0.25
CACNA2D1P54289 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CACNA2D1P54289 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CACNA2D1P54289 AC087499.6-201ENST00000411576 835 ntBASIC16.63■□□□□ 0.25
CACNA2D1P54289 COX5BP8-201ENST00000416911 349 ntBASIC16.63■□□□□ 0.25
CACNA2D1P54289 MYCLP2-201ENST00000449268 967 ntBASIC16.63■□□□□ 0.25
CACNA2D1P54289 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.63■□□□□ 0.25
CACNA2D1P54289 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms