Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PDX1P52945 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDX1P52945 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.24■□□□□ 0.03
PDX1P52945 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.24■□□□□ 0.03
PDX1P52945 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PDX1P52945 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
PDX1P52945 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 PDIA3P1-201ENST00000471856 1510 ntBASIC15.24■□□□□ 0.03
PDX1P52945 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.24■□□□□ 0.03
PDX1P52945 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PDX1P52945 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 AC132872.4-202ENST00000622924 2756 ntBASIC15.24■□□□□ 0.03
PDX1P52945 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.24■□□□□ 0.03
PDX1P52945 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PDX1P52945 KRT43P-201ENST00000434019 910 ntBASIC15.24■□□□□ 0.03
PDX1P52945 AL162726.2-201ENST00000438986 1017 ntBASIC15.24■□□□□ 0.03
PDX1P52945 TARDBPP1-201ENST00000442013 1203 ntBASIC15.24■□□□□ 0.03
PDX1P52945 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.24■□□□□ 0.03
PDX1P52945 SLC25A47P1-201ENST00000531577 414 ntBASIC15.24■□□□□ 0.03
PDX1P52945 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.24■□□□□ 0.03
PDX1P52945 AC243562.2-201ENST00000561247 970 ntBASIC15.24■□□□□ 0.03
PDX1P52945 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.24■□□□□ 0.03
PDX1P52945 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.24■□□□□ 0.03
PDX1P52945 BRI3BPP1-201ENST00000594224 787 ntBASIC15.24■□□□□ 0.03
PDX1P52945 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.24■□□□□ 0.03
PDX1P52945 CU634019.7-201ENST00000624153 1185 ntBASIC15.24■□□□□ 0.03
PDX1P52945 FP236241.2-201ENST00000624906 1185 ntBASIC15.24■□□□□ 0.03
PDX1P52945 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PDX1P52945 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.24■□□□□ 0.03
PDX1P52945 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.24■□□□□ 0.03
PDX1P52945 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.24■□□□□ 0.03
PDX1P52945 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.24■□□□□ 0.03
PDX1P52945 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDX1P52945 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.24■□□□□ 0.03
PDX1P52945 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 AC093525.8-201ENST00000624099 1342 ntBASIC15.23■□□□□ 0.03
PDX1P52945 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.23■□□□□ 0.03
PDX1P52945 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 AC010491.1-201ENST00000563101 2797 ntBASIC15.23■□□□□ 0.03
PDX1P52945 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PDX1P52945 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.23■□□□□ 0.03
PDX1P52945 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
PDX1P52945 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PDX1P52945 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.23■□□□□ 0.03
PDX1P52945 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.23■□□□□ 0.03
PDX1P52945 CTBP2P5-201ENST00000454986 1264 ntBASIC15.23■□□□□ 0.03
PDX1P52945 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.23■□□□□ 0.03
PDX1P52945 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.23■□□□□ 0.03
PDX1P52945 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.23■□□□□ 0.03
PDX1P52945 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.23■□□□□ 0.03
PDX1P52945 AL359711.2-201ENST00000563105 872 ntBASIC15.23■□□□□ 0.03
PDX1P52945 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.23■□□□□ 0.03
PDX1P52945 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.23■□□□□ 0.03
PDX1P52945 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.23■□□□□ 0.03
PDX1P52945 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDX1P52945 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms