Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.14■□□□□ 0.34
BRCA2P51587 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 TPM3P8-201ENST00000330554 643 ntBASIC17.14■□□□□ 0.33
BRCA2P51587 RN7SKP214-201ENST00000364208 315 ntBASIC17.14■□□□□ 0.33
BRCA2P51587 CHMP1AP1-201ENST00000445563 662 ntBASIC17.14■□□□□ 0.33
BRCA2P51587 SCARNA21-201ENST00000517026 139 ntBASIC17.14■□□□□ 0.33
BRCA2P51587 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCA2P51587 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCA2P51587 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCA2P51587 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCA2P51587 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCA2P51587 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
BRCA2P51587 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
BRCA2P51587 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.14■□□□□ 0.33
BRCA2P51587 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.14■□□□□ 0.33
BRCA2P51587 AC242376.2-201ENST00000619355 883 ntBASIC17.14■□□□□ 0.33
BRCA2P51587 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
BRCA2P51587 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
BRCA2P51587 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 ISCA2P1-201ENST00000425548 448 ntBASIC17.14■□□□□ 0.33
BRCA2P51587 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.14■□□□□ 0.33
BRCA2P51587 AC005324.6-201ENST00000587972 613 ntBASIC17.14■□□□□ 0.33
BRCA2P51587 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BRCA2P51587 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.14■□□□□ 0.33
BRCA2P51587 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.13■□□□□ 0.33
BRCA2P51587 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
BRCA2P51587 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.13■□□□□ 0.33
BRCA2P51587 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.13■□□□□ 0.33
BRCA2P51587 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.13■□□□□ 0.33
BRCA2P51587 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.13■□□□□ 0.33
BRCA2P51587 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.13■□□□□ 0.33
BRCA2P51587 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
BRCA2P51587 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BRCA2P51587 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.13■□□□□ 0.33
BRCA2P51587 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.13■□□□□ 0.33
BRCA2P51587 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.13■□□□□ 0.33
BRCA2P51587 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
BRCA2P51587 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
BRCA2P51587 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
BRCA2P51587 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCA2P51587 AC010491.1-201ENST00000563101 2797 ntBASIC17.12■□□□□ 0.33
BRCA2P51587 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.12■□□□□ 0.33
BRCA2P51587 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
BRCA2P51587 AC021723.1-201ENST00000486306 515 ntBASIC17.12■□□□□ 0.33
BRCA2P51587 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCA2P51587 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCA2P51587 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
BRCA2P51587 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
BRCA2P51587 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.12■□□□□ 0.33
BRCA2P51587 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.12■□□□□ 0.33
BRCA2P51587 AL161773.1-201ENST00000624845 863 ntBASIC17.12■□□□□ 0.33
BRCA2P51587 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
BRCA2P51587 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.12■□□□□ 0.33
BRCA2P51587 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
BRCA2P51587 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms