Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.39□□□□□ -0.11
NR4A2P43354 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NR4A2P43354 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
NR4A2P43354 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NR4A2P43354 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 CR383656.2-201ENST00000548656 2254 ntBASIC14.38□□□□□ -0.11
NR4A2P43354 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.38□□□□□ -0.11
NR4A2P43354 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 MIR648-201ENST00000385046 94 ntBASIC14.38□□□□□ -0.11
NR4A2P43354 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
NR4A2P43354 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.38□□□□□ -0.11
NR4A2P43354 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.38□□□□□ -0.11
NR4A2P43354 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.38□□□□□ -0.11
NR4A2P43354 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.38□□□□□ -0.11
NR4A2P43354 RFPL4AP1-201ENST00000530883 850 ntBASIC14.38□□□□□ -0.11
NR4A2P43354 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.38□□□□□ -0.11
NR4A2P43354 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.38□□□□□ -0.11
NR4A2P43354 AC091812.2-201ENST00000619081 385 ntBASIC14.38□□□□□ -0.11
NR4A2P43354 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NR4A2P43354 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.38□□□□□ -0.11
NR4A2P43354 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NR4A2P43354 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NR4A2P43354 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NR4A2P43354 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NR4A2P43354 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NR4A2P43354 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A2P43354 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A2P43354 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A2P43354 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NR4A2P43354 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.37□□□□□ -0.11
NR4A2P43354 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NR4A2P43354 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NR4A2P43354 AL645939.2-201ENST00000427340 991 ntBASIC14.37□□□□□ -0.11
NR4A2P43354 FAM185BP-201ENST00000443595 716 ntBASIC14.37□□□□□ -0.11
NR4A2P43354 CYMP-203ENST00000474680 1263 ntBASIC14.37□□□□□ -0.11
NR4A2P43354 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.37□□□□□ -0.11
NR4A2P43354 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.37□□□□□ -0.11
NR4A2P43354 AP000344.2-201ENST00000512987 629 ntBASIC14.37□□□□□ -0.11
NR4A2P43354 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NR4A2P43354 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.37□□□□□ -0.11
NR4A2P43354 AC068137.2-201ENST00000605408 478 ntBASIC14.37□□□□□ -0.11
NR4A2P43354 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
NR4A2P43354 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.37□□□□□ -0.11
NR4A2P43354 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.37□□□□□ -0.11
NR4A2P43354 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 TMBIM7P-203ENST00000641617 1718 ntBASIC14.37□□□□□ -0.11
NR4A2P43354 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NR4A2P43354 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NR4A2P43354 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NR4A2P43354 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NR4A2P43354 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NR4A2P43354 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms