Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
GDNFP39905 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.76□□□□□ -0.21
GDNFP39905 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDNFP39905 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
GDNFP39905 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GDNFP39905 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
GDNFP39905 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.75□□□□□ -0.21
GDNFP39905 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.75□□□□□ -0.21
GDNFP39905 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
GDNFP39905 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.75□□□□□ -0.21
GDNFP39905 AL513480.1-201ENST00000451731 511 ntBASIC13.75□□□□□ -0.21
GDNFP39905 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.75□□□□□ -0.21
GDNFP39905 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
GDNFP39905 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.75□□□□□ -0.21
GDNFP39905 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
GDNFP39905 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 AC064836.3-201ENST00000607928 673 ntBASIC13.75□□□□□ -0.21
GDNFP39905 BX640515.1-201ENST00000617215 977 ntBASIC13.75□□□□□ -0.21
GDNFP39905 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.75□□□□□ -0.21
GDNFP39905 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
GDNFP39905 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.75□□□□□ -0.21
GDNFP39905 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GDNFP39905 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.75□□□□□ -0.21
GDNFP39905 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDNFP39905 AC012569.1-201ENST00000591191 1524 ntBASIC13.74□□□□□ -0.21
GDNFP39905 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.74□□□□□ -0.21
GDNFP39905 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.74□□□□□ -0.21
GDNFP39905 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
GDNFP39905 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.74□□□□□ -0.21
GDNFP39905 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.74□□□□□ -0.21
GDNFP39905 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.74□□□□□ -0.21
GDNFP39905 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.74□□□□□ -0.21
GDNFP39905 HMGA1P7-201ENST00000406908 502 ntBASIC13.74□□□□□ -0.21
GDNFP39905 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.74□□□□□ -0.21
GDNFP39905 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.74□□□□□ -0.21
GDNFP39905 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.74□□□□□ -0.21
GDNFP39905 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.74□□□□□ -0.21
GDNFP39905 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.74□□□□□ -0.21
GDNFP39905 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
GDNFP39905 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms